Parsing Issues – Single Cell Portal / Disease (9)

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18,915 cells •
Ziegler et al., 2020
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Value: MONDO_0018076|MONDO_0005109
External Reference: MONDO:0018076|MONDO:0005109
Message: Ontology term with identifier 'MONDO:0018076|MONDO:0005109' not found
Homo sapiens Fibroblast +8 Tuberculosis +1 Seq-well
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Single Cell Portal

68,241 cells
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Cell type: No cell types are linked to ontology terms
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Value: PATO:0001487
External Reference: PATO:0001487
Message: Invalid ontology prefix 'PATO'. Expected one of: MONDO or PATO:0000461
Mus musculus Normal 10x 3' v3
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Single Cell Portal

33,872 cells
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⚠️
Cell type: No cell types are linked to ontology terms
⚠️
Organism: No organisms are linked to ontology terms
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Value: COVID-19
External Reference: COVID-19
Message: Invalid ontology prefix 'COVID-19'. Expected one of: MONDO or PATO:0000461
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Single Cell Portal

40,880 cells
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⚠️
Cell type: No cell types are linked to ontology terms
⚠️
Organism: No organisms are linked to ontology terms
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Value: COVID-19
External Reference: COVID-19
Message: Invalid ontology prefix 'COVID-19'. Expected one of: MONDO or PATO:0000461
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Single Cell Portal

131,613 cells
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Value: GO_0009636
External Reference: GO:0009636
Message: Invalid ontology prefix 'GO'. Expected one of: MONDO or PATO:0000461
Mus musculus Periportal region hepatocyte +10 Normal 10x 3' v3
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Single Cell Portal

104,553 cells •
Nault et al., 2022
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⚠️
Cell type: No cell types are linked to ontology terms
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Value: GO_0009636
External Reference: GO:0009636
Message: Invalid ontology prefix 'GO'. Expected one of: MONDO or PATO:0000461
Mus musculus Normal 10x 3' v3
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Single Cell Portal

47,001 cells
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⚠️
Cell type: No cell types are linked to ontology terms
⚠️
Organism: No organisms are linked to ontology terms
🔧
Value: COVID-19
External Reference: COVID-19
Message: Invalid ontology prefix 'COVID-19'. Expected one of: MONDO or PATO:0000461
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Single Cell Portal

16,015 cells
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⚠️
Cell type: No cell types are linked to ontology terms
🔧
Value: GO_0009636
External Reference: GO:0009636
Message: Invalid ontology prefix 'GO'. Expected one of: MONDO or PATO:0000461
Mus musculus Normal 10x 3' v3
Single Cell Portal logo

Single Cell Portal

106,792 cells
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⚠️
Cell type: No cell types are linked to ontology terms
⚠️
Organism: No organisms are linked to ontology terms
🔧
Value: COVID-19
External Reference: COVID-19
Message: Invalid ontology prefix 'COVID-19'. Expected one of: MONDO or PATO:0000461