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Data statistics
Organism
Cell Type
Tissue
Dev. Stage
Disease
Sex
Technology
Suspension Type
ASAP
✓ 43
✗ 42
50.59% success rate
✅
Unique organisms:
3
Used in datasets:
85
Linked to ontology:
3
Not linked to ontology:
0
⚠️
62.8%
Unique cell types:
182
Used in datasets:
614
Linked to ontology:
182
Not linked to ontology:
0
Parsing issues:
228
⚠️
97.3%
Unique tissues:
42
Used in datasets:
115
Linked to ontology:
42
Not linked to ontology:
0
Parsing issues:
3
✅
Unique dev. stages:
29
Used in datasets:
99
Linked to ontology:
29
Not linked to ontology:
0
✅
Unique diseases:
3
Used in datasets:
65
Linked to ontology:
3
Not linked to ontology:
0
✅
Unique sexes:
3
Used in datasets:
116
Linked to ontology:
3
Not linked to ontology:
0
✅
Unique technologies:
7
Used in datasets:
97
Linked to ontology:
7
Not linked to ontology:
0
✖
Unique suspension types:
0
Used in datasets:
0
Linked to ontology:
0
Not linked to ontology:
0
Bgee
✓ 40
✗ 0
100.0% success rate
✅
Unique organisms:
13
Used in datasets:
43
Linked to ontology:
13
Not linked to ontology:
0
⚠️
99.7%
Unique cell types:
463
Used in datasets:
717
Linked to ontology:
463
Not linked to ontology:
0
Parsing issues:
2
✅
Unique tissues:
74
Used in datasets:
95
Linked to ontology:
74
Not linked to ontology:
0
⚠️
86.0%
Unique dev. stages:
78
Used in datasets:
100
Linked to ontology:
78
Not linked to ontology:
0
Parsing issues:
14
✅
Unique diseases:
1
Used in datasets:
40
Linked to ontology:
1
Not linked to ontology:
0
✅
Unique sexes:
3
Used in datasets:
51
Linked to ontology:
3
Not linked to ontology:
0
⚠️
86.9%
Unique technologies:
4
Used in datasets:
46
Linked to ontology:
1
Not linked to ontology:
3
Parsing issues:
3
✖
Unique suspension types:
0
Used in datasets:
0
Linked to ontology:
0
Not linked to ontology:
0
CELLxGENE
✓ 2045
✗ 3
99.85% success rate
✅
Unique organisms:
8
Used in datasets:
2048
Linked to ontology:
8
Not linked to ontology:
0
✅
Unique cell types:
1089
Used in datasets:
24633
Linked to ontology:
1089
Not linked to ontology:
0
✅
Unique tissues:
678
Used in datasets:
8074
Linked to ontology:
678
Not linked to ontology:
0
✅
Unique dev. stages:
290
Used in datasets:
15026
Linked to ontology:
290
Not linked to ontology:
0
✅
Unique diseases:
219
Used in datasets:
2697
Linked to ontology:
219
Not linked to ontology:
0
✅
Unique sexes:
2
Used in datasets:
2735
Linked to ontology:
2
Not linked to ontology:
0
✅
Unique technologies:
50
Used in datasets:
2840
Linked to ontology:
50
Not linked to ontology:
0
✅
Unique suspension types:
2
Used in datasets:
1527
Linked to ontology:
0
Not linked to ontology:
2
Single Cell Portal
✓ 176
✗ 463
27.54% success rate
✅
Unique organisms:
22
Used in datasets:
442
Linked to ontology:
22
Not linked to ontology:
0
⚠️
81.6%
Unique cell types:
335
Used in datasets:
1511
Linked to ontology:
335
Not linked to ontology:
0
Parsing issues:
277
✖
Unique tissues:
0
Used in datasets:
0
Linked to ontology:
0
Not linked to ontology:
0
✖
Unique dev. stages:
0
Used in datasets:
0
Linked to ontology:
0
Not linked to ontology:
0
⚠️
98.4%
Unique diseases:
141
Used in datasets:
570
Linked to ontology:
141
Not linked to ontology:
0
Parsing issues:
9
✅
Unique sexes:
1
Used in datasets:
35
Linked to ontology:
1
Not linked to ontology:
0
⚠️
99.5%
Unique technologies:
42
Used in datasets:
475
Linked to ontology:
42
Not linked to ontology:
0
Parsing issues:
2
✖
Unique suspension types:
0
Used in datasets:
0
Linked to ontology:
0
Not linked to ontology:
0
Legend
✅
Fully Linked
⚠️
Partially Linked
✖
Not Provided
Data validation performed using
CELLxGENE schema v7.1.0
