Homo sapiens

Luminal cell of prostate epithelium Secretory cell Neuroendocrine cell Epithelial cell of urethra Basal cell of prostate epithelium

Transition zone of prostate Peripheral zone of prostate

29-year-old stage 31-year-old stage

Normal

Male

10x 3' v2

Cell

Mus musculus

T cell Neutrophil Club cell Natural killer cell Endothelial cell of lymphatic vessel Multiciliated columnar cell of tracheobronchial tree Mature nk t cell Cd8-positive, alpha-beta t cell Pulmonary neuroendocrine cell Classical monocyte Intermediate monocyte Smooth muscle cell of the pulmonary artery Plasmacytoid dendritic cell Myeloid dendritic cell Lung macrophage Regulatory t cell Bronchial smooth muscle cell Fibroblast of lung Alveolar macrophage Plasma cell Cd4-positive, alpha-beta t cell Vein endothelial cell Pulmonary interstitial fibroblast B cell Pericyte Adventitial cell Basophil Dendritic cell Pulmonary alveolar type 2 cell Non-classical monocyte

Lung

4-week-old stage 3-month-old stage 20-month-old stage and over 18-month-old stage

Normal

Female Male

10x 3' v2

Cell

Homo sapiens

Mammary gland epithelial cell Luminal epithelial cell of mammary gland

Breast

42-year-old stage 85-year-old stage 61-year-old stage 88-year-old stage 52-year-old stage 54-year-old stage 55-year-old stage 82-year-old stage 50-year-old stage 49-year-old stage 58-year-old stage 67-year-old stage 41-year-old stage 60-year-old stage 63-year-old stage 47-year-old stage 73-year-old stage

Invasive ductal breast carcinoma Invasive lobular breast carcinoma Breast carcinoma

Female

10x 5' v1 10x 3' v2

Cell

Mus musculus

Podocyte Endothelial cell Kidney interstitial fibroblast Blood vessel smooth muscle cell Kidney collecting duct intercalated cell Leukocyte Macrophage Kidney distal convoluted tubule epithelial cell Kidney granular cell Kidney collecting duct principal cell Kidney loop of henle thick ascending limb epithelial cell Macula densa epithelial cell Mesangial cell Kidney proximal convoluted tubule epithelial cell

Kidney

13-week-old stage

Normal

Male

Slide-seqv2

Homo sapiens

Midbrain-derived inhibitory neuron T cell Central nervous system macrophage Natural killer cell Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Committed oligodendrocyte precursor Cerebellar granule cell Lamp5 lhx6 neuron Pvalb chandelier gabaergic interneuron Medial ganglionic eminence derived interneuron Ependymal cell Microglial cell Thalamic excitatory neuron Choroid plexus epithelial cell B cell Pericyte Cerebral cortex neuron Neuron Monocyte Intratelencephalic-projecting glutamatergic cortical neuron Caudal ganglionic eminence derived interneuron Vascular associated smooth muscle cell Sst chodl gabaergic interneuron Astrocyte Fibroblast Mammillary body neuron

Intralaminar nuclear group

42-year-old stage 29-year-old stage

Normal

Male

10x 3' v3

Nucleus

Homo sapiens

Oligodendrocyte

Prefrontal cortex White matter of temporal lobe White matter of frontal lobe White matter of occipital lobe White matter of parietal lobe

53-year-old stage 68-year-old stage 82-year-old stage 72-year-old stage 81-year-old stage 70-year-old stage 76-year-old stage 83-year-old stage

Normal Alzheimer disease Leukoencephalopathy, diffuse hereditary, with spheroids 1

Female Male

10x 3' v3

Nucleus

Homo sapiens

Midbrain-derived inhibitory neuron T cell Central nervous system macrophage Natural killer cell Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Committed oligodendrocyte precursor Cerebellar granule cell Lamp5 lhx6 neuron Eccentric medium spiny neuron Pvalb chandelier gabaergic interneuron Medial ganglionic eminence derived interneuron Cerebellar inhibitory gabaergic interneuron Ependymal cell Microglial cell Thalamic excitatory neuron B cell Pericyte Cerebral cortex neuron Neuron Monocyte Intratelencephalic-projecting glutamatergic cortical neuron Caudal ganglionic eminence derived interneuron Vascular associated smooth muscle cell Astrocyte Fibroblast

Epithalamus

42-year-old stage 29-year-old stage

Normal

Male

10x 3' v3

Nucleus

Homo sapiens

T cell Natural killer cell Perivascular cell Endothelial cell Mature nk t cell Luminal epithelial cell of mammary gland Myoepithelial cell Cd8-positive, alpha-beta cytotoxic t cell Regulatory t cell Basal-myoepithelial cell of mammary gland Myeloid cell Fibroblast of breast Plasma cell Cd4-positive, alpha-beta t cell T follicular helper cell B cell

Mammary gland connective tissue

49-year-old stage 35-year-old stage 67-year-old stage 47-year-old stage 73-year-old stage

Triple-negative breast carcinoma

Female

10x 3' v2

Cell

Homo sapiens

Midbrain-derived inhibitory neuron T cell Central nervous system macrophage Natural killer cell Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Committed oligodendrocyte precursor Cerebellar granule cell Cerebellar inhibitory gabaergic interneuron Ependymal cell Microglial cell Choroid plexus epithelial cell Bergmann glial cell Pericyte Neuron Monocyte Intratelencephalic-projecting glutamatergic cortical neuron Caudal ganglionic eminence derived interneuron Vascular associated smooth muscle cell Astrocyte Fibroblast

Spinal cord

50-year-old stage

Normal

Male

10x 3' v3

Nucleus

Mus musculus

Neural stem cell Endothelial cell Contractile cell Vascular leptomeningeal cell (mmus) Neural cell Ependymal cell Microglial cell Neuroblast (sensu vertebrata) Neuron associated cell Central nervous system neuron Astrocyte Gabaergic neuron Neural progenitor cell

Postnatal subventricular zone

4-week-old stage

Normal

Mixed sex

10x genomics v3

Homo sapiens

Midbrain-derived inhibitory neuron T cell Central nervous system macrophage Natural killer cell Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Amygdala excitatory neuron Committed oligodendrocyte precursor Cerebellar granule cell Medial ganglionic eminence derived interneuron Cerebellar inhibitory gabaergic interneuron Ependymal cell Microglial cell Bergmann glial cell B cell Pericyte Neuron Monocyte Intratelencephalic-projecting glutamatergic cortical neuron Caudal ganglionic eminence derived interneuron Purkinje cell Vascular associated smooth muscle cell Astrocyte Unipolar brush cell Fibroblast

Parabrachial nucleus

42-year-old stage 29-year-old stage 50-year-old stage

Normal

Male

10x 3' v3

Nucleus

Homo sapiens

Dendritic cell, human Natural killer cell Endothelial cell of lymphatic vessel Erythrocyte Cytotoxic t cell Endothelial cell Hair follicular keratinocyte Basal cell of epidermis Macrophage Regulatory t cell Skin fibroblast Helper t cell Langerhans cell Spinous cell of epidermis Pericyte Melanocyte of skin Monocyte Granular cell of epidermis Suprabasal keratinocyte Fibroblast Fibroblast of papillary layer of dermis

Skin of body

28-year-old stage 23-year-old stage 32-year-old stage 60-year-old stage 47-year-old stage

Psoriasis Normal

Female Male

10x 3' v3

Cell