Mus musculus

Podocyte Endothelial cell Kidney interstitial fibroblast Blood vessel smooth muscle cell Kidney collecting duct intercalated cell Leukocyte Macrophage Kidney distal convoluted tubule epithelial cell Kidney granular cell Kidney collecting duct principal cell Kidney loop of henle thick ascending limb epithelial cell Macula densa epithelial cell Mesangial cell Kidney proximal convoluted tubule epithelial cell

Kidney

6-month-old stage

Autosomal dominant polycystic kidney disease

Male

Slide-seqv2

Homo sapiens

Podocyte Endothelial cell Kidney interstitial fibroblast Blood vessel smooth muscle cell Kidney collecting duct intercalated cell Leukocyte Macrophage Kidney distal convoluted tubule epithelial cell Kidney granular cell Kidney collecting duct principal cell Kidney loop of henle thick ascending limb epithelial cell Macula densa epithelial cell Mesangial cell Kidney proximal convoluted tubule epithelial cell

Cortex of kidney

53-year-old stage

Normal

Male

Slide-seqv2

Homo sapiens

Centrocyte Centroblast Memory b cell Mature b cell Plasmablast Naive b cell Tonsil germinal center b cell

Tonsil

9-year-old stage 3-year-old stage 5-year-old stage 6-year-old stage

Normal

Female Male

10x 5' v1 10x 3' v2

Cell

Homo sapiens

Medullary thymic epithelial cell type 2 Medullary thymic epithelial cell type 3 Corticomedullary thymic epithelial cell Myo-medullary thymic epithelial cell Medullary thymic epithelial cell type 1 Cortical thymic epithelial cell Neuro-medullary thymic epithelial cell Ciliated epithelial cell

Thymus

13th week post-fertilization stage 2-year-old stage 3-month-old stage 14th week post-fertilization stage 15th week post-fertilization stage 20th week post-fertilization stage 17th week post-fertilization stage 12th week post-fertilization stage 6-month-old stage 18th week post-fertilization stage 10-month-old stage Newborn stage (0-28 days) 24th week post-fertilization stage

Normal

Female Male

10x 5' v2 10x 5' v1 10x 3' v3 10x 3' v2

Cell

Homo sapiens

Germinal center b cell Mature b cell

Colorectum

69-year-old stage 91-year-old stage 42-year-old stage 89-year-old stage 71-year-old stage 53-year-old stage 61-year-old stage 52-year-old stage 48-year-old stage 56-year-old stage 55-year-old stage 84-year-old stage 82-year-old stage 50-year-old stage 90-year-old stage 51-year-old stage 57-year-old stage 72-year-old stage 81-year-old stage 49-year-old stage 35-year-old stage 58-year-old stage 59-year-old stage 67-year-old stage 77-year-old stage 64-year-old stage 45-year-old stage 62-year-old stage 70-year-old stage 60-year-old stage 78-year-old stage 36-year-old stage 47-year-old stage 76-year-old stage 73-year-old stage

Normal Colon adenocarcinoma

Female Male

10x 3' v3 10x 3' v2

Cell

Callithrix jacchus

Glutamatergic neuron

Lateral amygdaloid nucleus Medial amygdaloid nucleus Amygdala

Prime adult stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Endothelial cell Mature nk t cell Mast cell Epithelial cell Cd8-positive, alpha-beta memory t cell Macrophage Neuronal receptor cell Plasma cell Cd4-positive, alpha-beta memory t cell B cell Monocyte Myofibroblast cell Fibroblast

Right colon

21-year-old stage 52-year-old stage 38-year-old stage 55-year-old stage 50-year-old stage 51-year-old stage 58-year-old stage 18-year-old stage

Normal

Female Male

10x 3' v3

Cell

Homo sapiens

T cell Endothelial cell Smooth muscle cell Epithelial cell Macrophage Myelocyte B cell Fibroblast Dendritic cell

Thymus

2-year-old stage 3-month-old stage 6-month-old stage 19-month-old stage 5-month-old stage 14-month-old stage

Normal

Female Male

Visium spatial gene expression v1

Homo sapiens

Natural killer cell Mature nk t cell Cd4-positive helper t cell Cd8-positive, alpha-beta memory t cell Macrophage Unswitched memory b cell Tc1 cell Innate lymphoid cell Plasma cell Naive thymus-derived cd4-positive, alpha-beta t cell Naive b cell Dendritic cell Class switched memory b cell Effector memory cd8-positive, alpha-beta t cell

Breast

37-year-old stage 21-year-old stage 34-year-old stage 65-year-old stage 53-year-old stage 52-year-old stage 48-year-old stage 30-year-old stage 39-year-old stage 29-year-old stage 38-year-old stage 56-year-old stage 55-year-old stage 28-year-old stage 57-year-old stage 24-year-old stage 23-year-old stage 35-year-old stage 58-year-old stage 59-year-old stage 25-year-old stage 33-year-old stage 45-year-old stage 62-year-old stage 41-year-old stage 46-year-old stage 31-year-old stage 36-year-old stage 19-year-old stage 63-year-old stage 20-year-old stage 27-year-old stage 40-year-old stage

Normal

Female

10x 3' v3

Cell

Homo sapiens

Preadipocyte White adipocyte

Preadipocyte

56-year-old stage

Normal

Male

10x 3' v3

Nucleus

Microcebus murinus

Natural killer cell Endothelial cell of lymphatic vessel Endothelial cell Cd8-positive, alpha-beta t cell Endothelial cell of artery Melanocyte Basal cell of epidermis Epithelial cell of sweat gland Innate lymphoid cell Hair follicle cell Vein endothelial cell Langerhans cell Epidermal cell

Skin of body

Post-juvenile adult stage

Normal

Female Male

Smart-seq2 10x 3' v2

Cell

Mus musculus

Podocyte Endothelial cell Kidney interstitial fibroblast Blood vessel smooth muscle cell Kidney collecting duct intercalated cell Leukocyte Macrophage Kidney distal convoluted tubule epithelial cell Kidney granular cell Kidney collecting duct principal cell Kidney loop of henle thick ascending limb epithelial cell Macula densa epithelial cell Mesangial cell Kidney proximal convoluted tubule epithelial cell

Kidney

13-week-old stage

Normal

Male

Slide-seqv2