Homo sapiens

Cardiac muscle cell

Apex of heart Heart left ventricle Heart right ventricle Interventricular septum

Fifth decade stage Pediatric stage Eighth decade stage Fourth decade stage Seventh decade stage Postnatal stage Sixth decade stage Third decade stage

Normal Non-compaction cardiomyopathy Dilated cardiomyopathy Arrhythmogenic right ventricular cardiomyopathy

Female Male

10x 3' v2 10x 3' v3

Nucleus

Mus musculus

Myoblast Myotube Muscle precursor cell Myofibroblast cell

Embryo

Theiler stage 26 Theiler stage 16 Theiler stage 13 Theiler stage 14 Theiler stage 19 Theiler stage 25 Theiler stage 23 Theiler stage 17 Theiler stage 27 Theiler stage 20 Theiler stage 22 Theiler stage 12 Theiler stage 24 Theiler stage 21 Theiler stage 15 Theiler stage 18

Normal

Female Male

Sci-rna-seq3

Nucleus

Homo sapiens

Mature nk t cell Non-classical monocyte Neutrophil Kidney interstitial fibroblast Mast cell Renal interstitial pericyte Kidney loop of henle thin ascending limb epithelial cell Kidney collecting duct intercalated cell Epithelial cell of proximal tubule Papillary tips cell Kidney collecting duct principal cell Kidney interstitial alternatively activated macrophage T cell Kidney loop of henle thick ascending limb epithelial cell Mononuclear phagocyte Plasmacytoid dendritic cell, human Neural cell Parietal epithelial cell Kidney distal convoluted tubule epithelial cell Conventional dendritic cell Plasma cell Kidney connecting tubule epithelial cell Endothelial cell Kidney loop of henle thin descending limb epithelial cell B cell Podocyte

Cortex of kidney Kidney Renal medulla Renal papilla

Fifth decade stage 14-year-old stage 63-year-old stage 29-year-old stage 59-year-old stage 54-year-old stage 66-year-old stage 57-year-old stage Eighth decade stage Fourth decade stage Seventh decade stage 45-year-old stage 76-year-old stage 69-year-old stage Sixth decade stage Third decade stage

Normal Acute kidney failure Chronic kidney disease

Female Male

10x 3' v3

Nucleus

Homo sapiens

Non-classical monocyte Neutrophil Kidney interstitial fibroblast Mast cell Renal interstitial pericyte Kidney loop of henle thin ascending limb epithelial cell Kidney collecting duct intercalated cell Epithelial cell of proximal tubule Papillary tips cell Kidney collecting duct principal cell Kidney interstitial alternatively activated macrophage T cell Kidney loop of henle thick ascending limb epithelial cell Mononuclear phagocyte Plasmacytoid dendritic cell, human Neural cell Parietal epithelial cell Kidney distal convoluted tubule epithelial cell Lymphocyte Conventional dendritic cell Plasma cell Kidney connecting tubule epithelial cell Endothelial cell Kidney loop of henle thin descending limb epithelial cell B cell Podocyte

Cortex of kidney Kidney Renal medulla Renal papilla

64-year-old stage 52-year-old stage 43-year-old stage 41-year-old stage 35-year-old stage Fifth decade stage 14-year-old stage 63-year-old stage 29-year-old stage 31-year-old stage 42-year-old stage 49-year-old stage 59-year-old stage 54-year-old stage 66-year-old stage 57-year-old stage Eighth decade stage 53-year-old stage Fourth decade stage 56-year-old stage Seventh decade stage 47-year-old stage 36-year-old stage 45-year-old stage 70-year-old stage 76-year-old stage 69-year-old stage 40-year-old stage Sixth decade stage 39-year-old stage 30-year-old stage 48-year-old stage Third decade stage

Normal Acute kidney failure Chronic kidney disease

Female Male

10x 3' v3

Nucleus Cell

Mus musculus

Schwann cell Pancreatic a cell Type b pancreatic cell Hematopoietic cell Pancreatic d cell Pancreatic ductal cell Pancreatic endocrine cell Pancreatic stellate cell Pancreatic pp cell Endothelial cell Pancreatic acinar cell Cell

Islet of langerhans Pancreas

8-week-old stage 4-month-old stage 3-month-old stage 20-month-old stage and over Theiler stage 23 2-week-old stage Theiler stage 20 Theiler stage 22 Theiler stage 21 2-month-old stage 6-month-old stage 5-week-old stage

Normal Type 2 diabetes mellitus Type 1 diabetes mellitus Endocrine pancreas disorder

Female Male

10x 3' v2 10x 3' v3

Cell

Danio rerio

Peridermal cell Epidermal cell Epidermal mucus secreting cell Ionocyte

Cloaca Ectoderm-derived structure Head Integument Multicellular anatomical structure Periderm Skin epidermis Taste bud

Pharyngula:high-pec Pharyngula:prim-5 Segmentation:20-25 somites Larval:protruding-mouth Segmentation:14-19 somites Pharyngula:prim-25 Pharyngula:prim-15 Hatching:long-pec Segmentation:26+ somites Hatching:pec-fin

Normal

Sci-rna-seq3

Nucleus

Homo sapiens

P/d1 enteroendocrine cell Parietal cell Natural killer cell Epithelial cell of esophagus Activated cd8-positive, alpha-beta t cell Erythrocyte Capillary endothelial cell Mast cell Fibroblast Intestine goblet cell Monocyte Igg plasma cell Memory b cell Type g enteroendocrine cell Enteroendocrine cell Macrophage Gamma-delta t cell Dendritic cell Peptic cell Vein endothelial cell Cd4-positive helper t cell Foveolar cell of stomach Mucous neck cell of gastric gland Natural t-regulatory cell Enterocyte Iga plasma cell Stem cell Glandular cell of esophagus Endothelial cell of artery Memory t cell

Body of stomach Cardia of stomach Colon Duodenum Esophagogastric junction Ileum Lower esophagus Rectum Submucosal esophageal gland

80 year-old and over stage 80-year-old stage 64-year-old stage 50-year-old stage 65-year-old stage 68-year-old stage 82-year-old stage 43-year-old stage 41-year-old stage 63-year-old stage 29-year-old stage 58-year-old stage 73-year-old stage 84-year-old stage 34-year-old stage 42-year-old stage 86-year-old stage 54-year-old stage 66-year-old stage 57-year-old stage 74-year-old stage 83-year-old stage 53-year-old stage 56-year-old stage 55-year-old stage 77-year-old stage 36-year-old stage 45-year-old stage 70-year-old stage 69-year-old stage 67-year-old stage 88-year-old stage 60-year-old stage 62-year-old stage 27-year-old stage 48-year-old stage 51-year-old stage 71-year-old stage

Normal Barrett esophagus Gastritis Gastric intestinal metaplasia Gastric cancer

Female Male

10x 3' v2 10x 3' v3 10x 5' v1

Cell

Homo sapiens

Cultured cell

Mcf-7

Normal

Sci-plex

Nucleus

Sus scrofa Macaca mulatta Homo sapiens

Oligodendrocyte Neuroblast (sensu vertebrata) Vascular associated smooth muscle cell Leukocyte Pericyte Macrophage T cell Neural cell Myeloid cell Oligodendrocyte precursor cell Hippocampal astrocyte Microglial cell Pyramidal neuron Neuron Granule cell Brain vascular cell Dentate gyrus neuron Endothelial cell Hippocampal granule cell Endothelial cell of artery Astrocyte

Ammon's horn Dentate gyrus of hippocampal formation Entorhinal cortex Subiculum Ca1 field of hippocampus Hippocampal field

50-year-old stage 44-year-old stage 79-year-old stage 48-year-old stage 51-year-old stage

Normal

Female Male

10x genomics v3

Homo sapiens

Sst chodl gabaergic interneuron Neuron

Brodmann (1909) area 13 Brodmann (1909) area 14 Brodmann (1909) area 19 Brodmann (1909) area 23 Brodmann (1909) area 24 Brodmann (1909) area 25 Brodmann (1909) area 32 Brodmann (1909) area 38 Brodmann (1909) area 40 Brodmann (1909) area 43 Brodmann (1909) area 46 Accessory basal amygdaloid nucleus Agranular insular cortex Anterior cortical amygdaloid nucleus Anterior nuclear group Anterior olfactory nucleus Basolateral amygdaloid nuclear complex Bed nucleus of stria terminalis Body of caudate nucleus Central amygdaloid nucleus Centromedian nucleus of thalamus Cerebellar nuclear complex Cerebellar vermis Cerebrocerebellum Claustrum of brain Corticomedial nuclear complex Cuneus cortex Dentate gyrus of hippocampal formation Dorsal tegmental nucleus Epithalamus Extrastriate cortex Globus pallidus Granular insular cortex Gray matter of midbrain Hippocampal field Hypothalamus Inferior frontal gyrus Inferior olivary complex Inferior temporal gyrus Intralaminar nuclear group Lateral amygdaloid nucleus Lateral entorhinal cortex Lateral geniculate body Lateral nuclear group of thalamus Lateral posterior nucleus of thalamus Mammillary body Medial dorsal nucleus of thalamus Medial entorhinal cortex Medial geniculate body Medial zone of hypothalamus Median tuberal portion Midbrain nucleus Midbrain tectum Middle temporal gyrus Nucleus accumbens Nucleus of dorsal thalamus Nucleus of medulla oblongata Parabrachial nucleus Perirhinal cortex Piriform cortex Pontine nuclear group Pontine reticular formation Pontine tegmentum Posterior parahippocampal gyrus Preoptic area Pretectal region Primary auditory cortex Primary motor cortex Primary somatosensory cortex Primary visual cortex Pulvinar nucleus Putamen Red nucleus Retrosplenial region Rostral ca3 Septal nuclear complex Spinal cord Subicular complex Substantia innominata Substantia nigra Subthalamic nucleus Superior parietal cortex Superior temporal gyrus Supraoptic nucleus Temporal fusiform gyrus Uncal ca1 Ventral anterior nucleus of thalamus

50-year-old stage 29-year-old stage 42-year-old stage 60-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Mus musculus

Hepatocyte

Embryo

Theiler stage 26 Theiler stage 16 Theiler stage 13 Theiler stage 14 Theiler stage 19 Theiler stage 25 Theiler stage 23 Theiler stage 17 Theiler stage 27 Theiler stage 20 Theiler stage 22 Theiler stage 24 Theiler stage 21 Theiler stage 15 Theiler stage 18

Normal

Female Male

Sci-rna-seq3

Nucleus

Homo sapiens

Neuroblast (sensu vertebrata)

Basal forebrain Brain Caudate-putamen Cerebellar peduncular complex Cerebellum Cerebral subcortex Choroid plexus epithelium Cortex Diencephalon Dorsal plus ventral thalamus Entorhinal cortex Forebrain Frontal cortex Head Hindbrain Hippocampal formation Hypothalamus Lower layers of the cortex Medulla oblongata Metencephalon Midbrain Midbrain tectum Occipital cortex Pons Striatum Telencephalon Upper layers of the cortex

15th week post-fertilization stage 11th week post-fertilization stage Carnegie stage 15 14th week post-fertilization stage Carnegie stage 18 9th week post-fertilization stage 13th week post-fertilization stage Carnegie stage 22 12th week post-fertilization stage 10th week post-fertilization stage Carnegie stage 16 Carnegie stage 20

Normal

10x 3' v2 10x 3' v3

Cell