Mus musculus

Hepatocyte

Embryo

Theiler stage 22 Theiler stage 27 Theiler stage 24 Theiler stage 18 Theiler stage 25 Theiler stage 14 Theiler stage 16 Theiler stage 17 Theiler stage 15 Theiler stage 19 Theiler stage 26 Theiler stage 13 Theiler stage 20 Theiler stage 21 Theiler stage 23

Normal

Female Male

Sci-rna-seq3

Nucleus

Homo sapiens

Neuroblast (sensu vertebrata)

Choroid plexus epithelium Striatum Medulla oblongata Hindbrain Telencephalon Cortex Midbrain Dorsal plus ventral thalamus Lower layers of the cortex Frontal cortex Entorhinal cortex Midbrain tectum Metencephalon Basal forebrain Cerebellum Brain Hypothalamus Cerebellar peduncular complex Upper layers of the cortex Caudate-putamen Hippocampal formation Diencephalon Pons Cerebral subcortex Occipital cortex Forebrain Head

13th week post-fertilization stage 14th week post-fertilization stage 15th week post-fertilization stage 12th week post-fertilization stage Carnegie stage 20 9th week post-fertilization stage 10th week post-fertilization stage Carnegie stage 22 Carnegie stage 16 Carnegie stage 15 Carnegie stage 18 11th week post-fertilization stage

Normal

10x 3' v3 10x 3' v2

Cell

Homo sapiens

Glutamatergic neuron

Brodmann (1909) area 9 Brodmann (1909) area 7 Brodmann (1909) area 17

66-year-old stage 75-year-old stage 91-year-old stage 89-year-old stage 93-year-old stage 87-year-old stage 71-year-old stage 85-year-old stage 61-year-old stage 88-year-old stage 52-year-old stage 68-year-old stage 92-year-old stage 111-year-old stage 82-year-old stage 80-year-old stage 57-year-old stage 81-year-old stage 97-year-old stage 58-year-old stage 67-year-old stage 62-year-old stage 86-year-old stage 70-year-old stage 76-year-old stage 79-year-old stage 73-year-old stage 83-year-old stage

Normal Alzheimer disease

Female Male

10x 3' v3 Drop-seq 10x 3' v2

Nucleus

Homo sapiens

T cell Neutrophil Natural killer cell Endothelial cell of lymphatic vessel Gamma-delta t cell Mast cell Cd8-positive, alpha-beta t cell Iga plasma cell Endothelial cell of artery Capillary endothelial cell Schwann cell Melanocyte Smooth muscle cell Sweat secreting cell Hair follicular keratinocyte Igg plasma cell Macrophage Innate lymphoid cell Regulatory t cell Skin fibroblast Plasmablast Keratinocyte Sebaceous gland cell Vein endothelial cell Pericyte Naive b cell Dendritic cell

Normal Atopic eczema

10x 3' v3 10x 3' v2

Homo sapiens

T cell Neutrophil Natural killer cell Endothelial cell of lymphatic vessel Gamma-delta t cell Mast cell Cd8-positive, alpha-beta t cell Iga plasma cell Endothelial cell of artery Capillary endothelial cell Schwann cell Melanocyte Smooth muscle cell Sweat secreting cell Hair follicular keratinocyte Igg plasma cell Macrophage Innate lymphoid cell Regulatory t cell Skin fibroblast Plasmablast Keratinocyte Sebaceous gland cell Vein endothelial cell Pericyte Naive b cell Dendritic cell

Skin of body

21-year-old stage 61-year-old stage 29-year-old stage Adult stage 27-year-old stage

Normal Atopic eczema

Female Male

10x 3' v3 10x 3' v2

Cell

Macaca mulatta

Oligodendrocyte

Dorsolateral prefrontal cortex Brodmann (1909) area 19 Medial dorsal nucleus of thalamus Primary visual cortex Ventral lateral nucleus of thalamus Inferior temporal gyrus Medulla oblongata Prefrontal cortex Midbrain Entorhinal cortex Nucleus accumbens Cerebrocerebellum Primary somatosensory cortex Primary auditory cortex Primary motor cortex Inferior parietal cortex Head of caudate nucleus Corpus callosum Hippocampal formation Perirhinal cortex Pons Cerebellar vermis Anterior cingulate cortex Superior temporal sulcus Superior parietal cortex Lateral geniculate body Amygdala

Juvenile stage Prime adult stage

Normal

Female Male

Sci-rna-seq3

Nucleus

Homo sapiens

Oligodendrocyte

Cranial nerve ii Optic disc

69-year-old stage 37-year-old stage 75-year-old stage 21-year-old stage 34-year-old stage 65-year-old stage 42-year-old stage 43-year-old stage 71-year-old stage 85-year-old stage 53-year-old stage 61-year-old stage 52-year-old stage 54-year-old stage 68-year-old stage 30-year-old stage 17-year-old stage 56-year-old stage 15-year-old stage 82-year-old stage 50-year-old stage 72-year-old stage 81-year-old stage 74-year-old stage 16-year-old stage 58-year-old stage 67-year-old stage 90 year-old and over stage 3-year-old stage 32-year-old stage 77-year-old stage 33-year-old stage 64-year-old stage 45-year-old stage 62-year-old stage 70-year-old stage 46-year-old stage 60-year-old stage 18-year-old stage 63-year-old stage 47-year-old stage 76-year-old stage 11-year-old stage 27-year-old stage 10-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Mus musculus

Glutamatergic neuron Endothelial cell Oligodendrocyte Smooth muscle cell Microglial cell Leptomeningeal cell Pericyte Astrocyte Gabaergic neuron

Primary motor cortex

Prime adult stage

Normal

Male

Merfish

Homo sapiens

Cycling t cell Natural killer cell Mast cell Exhausted t cell Cd4-positive helper t cell Effector memory cd4-positive, alpha-beta t cell Plasmacytoid dendritic cell Igg plasma cell Myeloid dendritic cell Cycling macrophage Macrophage Cd4-positive, cd25-positive, ccr4-positive, alpha-beta regulatory t cell Memory b cell T follicular helper cell Naive t cell Cd8-positive, alpha-beta regulatory t cell Conventional dendritic cell Effector memory cd8-positive, alpha-beta t cell

Breast

66-year-old stage 69-year-old stage 37-year-old stage Middle aged stage 34-year-old stage 65-year-old stage 42-year-old stage 43-year-old stage Sixth decade stage 71-year-old stage 85-year-old stage 61-year-old stage 88-year-old stage 52-year-old stage 54-year-old stage 30-year-old stage 29-year-old stage 38-year-old stage Fifth decade stage 55-year-old stage 84-year-old stage 82-year-old stage 50-year-old stage 80-year-old stage 57-year-old stage 80 year-old and over stage 49-year-old stage 35-year-old stage Seventh decade stage 58-year-old stage 59-year-old stage 25-year-old stage Adult stage 67-year-old stage Late adult stage 32-year-old stage 64-year-old stage 45-year-old stage 62-year-old stage 41-year-old stage 70-year-old stage 46-year-old stage 60-year-old stage 60-79 year-old stage 36-year-old stage 63-year-old stage Eighth decade stage 47-year-old stage 79-year-old stage 73-year-old stage 83-year-old stage Prime adult stage Ninth decade stage

Invasive ductal breast carcinoma Breast cancer Estrogen-receptor positive breast cancer Breast apocrine carcinoma Invasive lobular breast carcinoma Metaplastic breast carcinoma Her2 positive breast carcinoma Breast mucinous carcinoma Triple-negative breast carcinoma Invasive tubular breast carcinoma Breast carcinoma

Female Male

10x 5' v2 10x 5' transcription profiling 10x 5' v1 10x 3' v3 10x 3' v2

Cell

Homo sapiens

Retinal astrocyte Astrocyte

Cranial nerve ii Optic disc

69-year-old stage 37-year-old stage 75-year-old stage 21-year-old stage 34-year-old stage 65-year-old stage 42-year-old stage 43-year-old stage 71-year-old stage 85-year-old stage 53-year-old stage 61-year-old stage 52-year-old stage 54-year-old stage 68-year-old stage 30-year-old stage 17-year-old stage 56-year-old stage 15-year-old stage 82-year-old stage 50-year-old stage 72-year-old stage 81-year-old stage 74-year-old stage 16-year-old stage 58-year-old stage 25-year-old stage 67-year-old stage 90 year-old and over stage 3-year-old stage 32-year-old stage 77-year-old stage 33-year-old stage 64-year-old stage 45-year-old stage 62-year-old stage 70-year-old stage 46-year-old stage 60-year-old stage 18-year-old stage Newborn stage (0-28 days) 63-year-old stage 47-year-old stage 76-year-old stage 11-year-old stage 27-year-old stage 10-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens