Rattus norvegicus

Glutamatergic neuron Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Microglial cell Gabaergic interneuron Pvalb gabaergic interneuron Astrocyte Sst gabaergic interneuron Gabaergic neuron

Amygdala

Fully formed stage

Normal

Male

10x 3' v3

Nucleus

Macaca mulatta

T cell Neutrophil Mast cell Epithelial cell Macrophage Eosinophil B cell

Disease

Seq-well

Homo sapiens

Central memory cd4-positive, alpha-beta t cell Natural killer cell Erythrocyte Gamma-delta t cell Myeloid dendritic cell, human Cd8-positive, alpha-beta t cell Platelet Effector memory cd4-positive, alpha-beta t cell Plasmacytoid dendritic cell Cd4-positive, alpha-beta cytotoxic t cell Memory regulatory t cell Naive thymus-derived cd8-positive, alpha-beta t cell Memory b cell Innate lymphoid cell Plasmablast Hematopoietic stem cell Cd4-positive, alpha-beta t cell Cd14-positive monocyte Naive regulatory t cell Cd14-low, cd16-positive monocyte B cell Naive thymus-derived cd4-positive, alpha-beta t cell Mucosal invariant t cell Central memory cd8-positive, alpha-beta t cell Naive b cell Double negative thymocyte Conventional dendritic cell Cd16-negative, cd56-bright natural killer cell, human Effector memory cd8-positive, alpha-beta t cell

Blood

Normal

10x 3' v3

Cell

Homo sapiens

Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Microglial cell Neuron Astrocyte

Frontal cortex

66-year-old stage 43-year-old stage 71-year-old stage 61-year-old stage 54-year-old stage 68-year-old stage 56-year-old stage 50-year-old stage 51-year-old stage 72-year-old stage 58-year-old stage 59-year-old stage 70-year-old stage 47-year-old stage 73-year-old stage

Amyotrophic lateral sclerosis Amyotrophic lateral sclerosis 26 with or without frontotemporal dementia Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Be cell Memory b cell Plasma cell Transitional stage b cell Naive b cell

Blood

34-year-old stage 65-year-old stage 26-year-old stage 61-year-old stage 30-year-old stage 29-year-old stage 56-year-old stage 55-year-old stage 28-year-old stage 57-year-old stage 12-year-old stage 35-year-old stage 58-year-old stage 59-year-old stage 25-year-old stage 32-year-old stage 33-year-old stage 64-year-old stage 62-year-old stage 60-year-old stage 31-year-old stage 36-year-old stage 63-year-old stage 11-year-old stage 27-year-old stage

Cytomegalovirus infection Normal

Female Male

10x 3' v3

Cell

Mus musculus

Glutamatergic neuron Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Smooth muscle cell Macrophage Leptomeningeal cell Pericyte Astrocyte Gabaergic neuron

Primary motor cortex

Prime adult stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Perivascular cell Extravillous trophoblast Placental villous trophoblast Macrophage Endothelial cell of placenta Hofbauer cell Fibroblast

Placenta

Carnegie stage 11 Carnegie stage 14 Carnegie stage 09 Carnegie stage 13 Carnegie stage 23 Carnegie stage 12 Carnegie stage 22 Carnegie stage 18

Plasmodium malariae malaria Listeriosis Toxoplasmosis Normal

Female

10x 3' v3

Cell

Pan troglodytes

T cell L2/3 intratelencephalic projecting glutamatergic neuron Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Vascular leptomeningeal cell Erythroid lineage cell Smooth muscle cell Inhibitory interneuron Pvalb chandelier gabaergic interneuron Lamp5 gabaergic interneuron Macrophage L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex Microglial cell Vip gabaergic interneuron Myeloid cell L5 extratelencephalic projecting glutamatergic cortical neuron L6b glutamatergic cortical neuron L6 corticothalamic-projecting glutamatergic cortical neuron Pvalb gabaergic interneuron B cell Pericyte Astrocyte L5/6 near-projecting glutamatergic neuron of the primary motor cortex Sst gabaergic interneuron

Dorsolateral prefrontal cortex

Prime adult stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

T cell Neutrophil Hepatocyte Erythrocyte Endothelial cell Mature nk t cell Mast cell Macrophage Keratinocyte Plasma cell Malignant cell B cell Monocyte Fibroblast Chondrocyte

Lung Neck Breast Axilla Liver Bone spine

37-year-old stage 43-year-old stage 53-year-old stage 52-year-old stage 54-year-old stage 30-year-old stage 44-year-old stage 29-year-old stage 38-year-old stage 55-year-old stage 50-year-old stage 28-year-old stage 57-year-old stage 35-year-old stage 58-year-old stage 32-year-old stage 64-year-old stage 41-year-old stage 60-year-old stage 36-year-old stage 40-year-old stage

Breast cancer

Female

10x 3' v3 10x 3' v2

Cell

Homo sapiens

T cell Endocardial cell Endothelial cell of lymphatic vessel Cardiocyte Endothelial cell Mast cell Adipocyte Macrophage Cardiac muscle cell Pericyte Epicardial adipocyte Neuron Vascular associated smooth muscle cell Fibroblast of cardiac tissue

Heart

3-month-old stage 17-year-old stage 9-year-old stage 16-year-old stage 2-month-old stage 3-year-old stage 8-month-old stage 11-year-old stage 7-month-old stage 4-year-old stage

Tetralogy of fallot Hypoplastic left heart syndrome Dilated cardiomyopathy Congenital heart disease Hypertrophic cardiomyopathy

Female Male

10x 3' v3

Nucleus

Homo sapiens

Tip cell Glioblast (sensu vertebrata) Natural killer cell Erythroid progenitor cell Oligodendrocyte precursor cell Mechanoreceptor cell Arachnoid barrier cell Perivascular cell Endothelial cell Retinal ganglion cell Mast cell Platelet Endothelial cell of arteriole Mucosa-associated lymphoid tissue macrophage Mesenchyme condensation cell Endothelial cell of artery Capillary endothelial cell Schwann cell Smooth muscle cell Epithelial cell Neural crest cell Choroid plexus macrophage Microglial cell Innate lymphoid cell Forebrain neuroblast Forebrain radial glial cell Neuroblast (sensu vertebrata) Embryonic blood vessel endothelial progenitor cell Radial glial cell Meningeal macrophage Leptomeningeal cell Pinealocyte Common myeloid progenitor Vein endothelial cell Mesenchymal cell Megakaryocyte Interneuron Metamyelocyte Choroid plexus epithelial cell B cell Pericyte Spinal cord radial glial cell Circulating fibrocyte Promyelocyte Neuron Retinal cell Perivascular macrophage Reticulocyte Neuronal-restricted precursor Monocyte Fibroblast of choroid plexus Erythroblast Mesothelial cell of dura mater Fibroblast Dendritic cell Neural progenitor cell Schwann cell precursor Chondrocyte

Forebrain meninges Brain meninx Meninx

13th week post-fertilization stage 12th week post-fertilization stage Carnegie stage 20 9th week post-fertilization stage Carnegie stage 23 10th week post-fertilization stage Carnegie stage 21 Carnegie stage 16 Carnegie stage 18

Normal

Female Male

10x 3' v3

Cell

Mus musculus

Osteoblast Neutrophil Sustentacular cell Stromal cell Natural killer cell Gamma-delta t cell Endothelial cell Oligodendrocyte Alpha-beta t cell Mast cell Cd8-positive, alpha-beta t cell Group 2 innate lymphoid cell Serous secreting cell Basal cell Schwann cell Ionocyte Smooth muscle cell Epithelial cell Plasmacytoid dendritic cell Precursor b cell Olfactory receptor cell Group 3 innate lymphoid cell Goblet cell Tuft cell Macrophage Vomeronasal sensory neuron Hematopoietic stem cell Plasma cell Cd4-positive, alpha-beta t cell Glandular secretory epithelial cell Ciliated epithelial cell B cell Pericyte Granulocyte monocyte progenitor cell Monocyte Fibroblast Osteoclast Dendritic cell Neural progenitor cell Chondrocyte

Normal Influenza

10x 3' v3