Mus musculus

Endothelial cell of hepatic sinusoid T cell Neutrophil Periportal region hepatocyte Centrilobular region hepatocyte Liver dendritic cell Hepatic stellate cell Macrophage Hepatic portal fibroblast Cholangiocyte B cell

Normal

10x 3' v3

Homo sapiens

Peg cell Stromal cell Endothelial cell of lymphatic vessel Fallopian tube secretory epithelial cell Perivascular cell Endothelial cell Mast cell Smooth muscle cell Lymphocyte Macrophage Plasma cell Ciliated epithelial cell

Ampulla of fallopian tube Fimbria of fallopian tube

37-year-old stage 65-year-old stage 42-year-old stage 43-year-old stage 61-year-old stage 48-year-old stage 44-year-old stage 55-year-old stage 72-year-old stage 32-year-old stage 62-year-old stage 70-year-old stage 47-year-old stage 40-year-old stage

Normal

Female

10x 3' v3 Drop-seq

Cell

Macaca mulatta

T cell L2/3 intratelencephalic projecting glutamatergic neuron Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Vascular leptomeningeal cell Erythroid lineage cell Smooth muscle cell Inhibitory interneuron Pvalb chandelier gabaergic interneuron Lamp5 gabaergic interneuron Macrophage L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex Microglial cell Vip gabaergic interneuron Myeloid cell L5 extratelencephalic projecting glutamatergic cortical neuron L6b glutamatergic cortical neuron L6 corticothalamic-projecting glutamatergic cortical neuron Pvalb gabaergic interneuron B cell Pericyte Astrocyte L5/6 near-projecting glutamatergic neuron of the primary motor cortex Sst gabaergic interneuron

Dorsolateral prefrontal cortex

Prime adult stage

Normal

Female Male

10x 3' v3

Nucleus

Mus musculus

Neutrophil Stromal cell Natural killer cell Endothelial cell Mast cell Cd8-positive, alpha-beta t cell Plasmacytoid dendritic cell Macrophage Innate lymphoid cell Plasma cell Cd4-positive, alpha-beta t cell Eosinophil B cell Neuron Monocyte Conventional dendritic cell

Brain meninx Subdural space Coronal suture Brain Dura mater Bone marrow Meningeal dura mater

9-week-old stage 3-month-old stage Theiler stage 25 16-month-old stage 20-month-old stage and over 2-month-old stage Theiler stage 23

Normal

Female Male

10x 5' v1 10x 3' v3 10x 3' v2

Cell

Homo sapiens

Group 3 innate lymphoid cell Cd16-positive, cd56-dim natural killer cell, human Innate lymphoid cell Immature innate lymphoid cell Group 1 innate lymphoid cell Cd16-negative, cd56-bright natural killer cell, human

Lung Inguinal lymph node Jejunal epithelium Epithelial lining fluid Thoracic lymph node Spleen Jejunum lamina propria Blood Bone marrow Mesenteric lymph node

75-year-old stage Sixth decade stage 68-year-old stage 48-year-old stage 56-year-old stage Fifth decade stage Third decade stage 23-year-old stage 25-year-old stage 67-year-old stage 33-year-old stage 64-year-old stage Fourth decade stage 20-year-old stage Eighth decade stage 73-year-old stage 27-year-old stage

Normal

Female Male

10x 5' v2 10x 3' v3

Cell

Homo sapiens

Cardiac muscle cell

Normal

Spatial transcriptomics

Homo sapiens

Pyramidal neuron Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Microglial cell Interneuron Cerebral cortex neuron Astrocyte

Hippocampal formation

37-year-old stage 26-year-old stage 44-year-old stage 24-year-old stage 60-year-old stage

Epilepsy

Female Male

10x 3' v3 10x 3' v2

Nucleus

Homo sapiens

Lamp5 gabaergic interneuron Vip gabaergic interneuron Caudal ganglionic eminence derived interneuron Sncg gabaergic interneuron

Dorsolateral prefrontal cortex Primary visual cortex Middle temporal gyrus Primary somatosensory cortex Primary auditory cortex Primary motor cortex Anterior cingulate cortex Angular gyrus

42-year-old stage 43-year-old stage Sixth decade stage 29-year-old stage 50-year-old stage 60-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

T cell Neutrophil Stromal cell Natural killer cell Erythrocyte Endothelial cell Mature nk t cell Hematopoietic precursor cell Mast cell Cd8-positive, alpha-beta t cell Classical monocyte Intermediate monocyte Plasmacytoid dendritic cell Myeloid dendritic cell Macrophage Innate lymphoid cell Regulatory t cell Plasma cell Cd4-positive, alpha-beta t cell Cd8-positive, alpha-beta thymocyte Cd4-positive, alpha-beta thymocyte B cell Naive thymus-derived cd4-positive, alpha-beta t cell Monocyte Non-classical monocyte

Inguinal lymph node Lymph node Mesenteric lymph node

69-year-old stage 61-year-old stage 56-year-old stage 59-year-old stage 45-year-old stage 60-year-old stage

Normal

Female Male

10x 5' v2 Smart-seq2 10x 3' v3

Cell

Homo sapiens

T cell Mature nk t cell Pro-b cell Plasmacytoid dendritic cell Precursor b cell Common dendritic progenitor Mature b cell Hematopoietic stem cell Plasma cell Hematopoietic multipotent progenitor cell Granulocyte monocyte progenitor cell Common lymphoid progenitor Immature b cell Megakaryocyte-erythroid progenitor cell Monocyte Conventional dendritic cell Early pro-b cell

Blood

3-month-old stage 9-month-old stage 6-month-old stage 10-month-old stage 2-month-old stage 8-month-old stage 1-month-old stage Newborn stage (0-28 days) 4-month-old stage 11-month-old stage 7-month-old stage

B-cell acute lymphoblastic leukemia

Female Male

10x 3' v3

Cell

Homo sapiens

L2/3-6 intratelencephalic projecting glutamatergic neuron

Middle temporal gyrus

69-year-old stage 75-year-old stage 65-year-old stage 89-year-old stage 43-year-old stage 87-year-old stage 85-year-old stage 88-year-old stage 68-year-old stage 29-year-old stage 84-year-old stage 82-year-old stage 50-year-old stage 80-year-old stage 72-year-old stage 81-year-old stage 80 year-old and over stage Adult stage 77-year-old stage 86-year-old stage 70-year-old stage 60-year-old stage 78-year-old stage 83-year-old stage

Normal Dementia

Female Male

10x multiome 10x 3' v3

Nucleus

Homo sapiens

T cell Neutrophil Natural killer cell Endothelial cell of lymphatic vessel Endothelial cell Mast cell Smooth muscle cell Macrophage Subcutaneous adipocyte B cell Mesenchymal stem cell of abdominal adipose tissue Pericyte Monocyte Dendritic cell

Normal

10x 3' v3