Homo sapiens

Intestine goblet cell Best4+ enterocyte Paneth cell Enteroendocrine cell Intestinal crypt stem cell Tuft cell of small intestine Enterocyte Transit amplifying cell Mucous neck cell of gastric gland Foveolar cell of stomach M cell of gut

Duodenum Ileal epithelium Small intestine Ileum Ileum lamina propria Lamina propria of small intestine Epithelium of small intestine Jejunum Duodenal epithelium Mesenteric lymph node

13-year-old stage Sixth decade stage 87-year-old stage 52-year-old stage Fifth decade stage 50-year-old stage 12-year-old stage Third decade stage 9-year-old stage 14-year-old stage Seventh decade stage 67-year-old stage 45-year-old stage 60-year-old stage 31-year-old stage Eighth decade stage Prime adult stage 11-year-old stage 6-year-old stage 10-year-old stage 4-year-old stage

Normal Crohn disease

Female Male

10x 3' v1 10x 5' v2 10x 5' transcription profiling 10x 5' v1 10x 3' v2

Cell

Homo sapiens

T cell Endothelial cell of venule Endothelial cell of lymphatic vessel Mast cell Endothelial cell of arteriole Schwann cell Smooth muscle cell Preadipocyte Adipocyte Macrophage Endothelial stalk cell Neuron associated cell Mesothelial cell B cell Pericyte Erythroblast

Subcutaneous abdominal adipose tissue Visceral abdominal adipose tissue

66-year-old stage 37-year-old stage 21-year-old stage 26-year-old stage 53-year-old stage 54-year-old stage 28-year-old stage 51-year-old stage 35-year-old stage 62-year-old stage 41-year-old stage 18-year-old stage 47-year-old stage 27-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Natural killer cell Endothelial cell of lymphatic vessel Gamma-delta t cell Endothelial cell Cd8-positive, alpha-beta t cell Cd141-positive myeloid dendritic cell Basal cell Epithelial cell Plasmacytoid dendritic cell Endothelial cell of vascular tree Macrophage Regulatory t cell Keratinocyte Malignant cell Mesenchymal stem cell of adipose tissue B cell Pericyte Granulocyte monocyte progenitor cell Mesenchymal stem cell Naive b cell Myofibroblast cell Neural progenitor cell

Cervical cancer

10x 3' v3

Mus musculus

Mature cd4 single-positive thymocyte Natural killer cell Erythrocyte Gamma-delta t cell Double-positive blast Double-positive, alpha-beta thymocyte Leukocyte Thymic macrophage Mature cd8 single-positive thymocyte Cd8-positive, alpha-beta thymocyte Cd4-positive, alpha-beta thymocyte B cell Double negative thymocyte

Thymus

24-day-old stage 5-week-old stage 4-week-old stage 7-week-old stage 6-week-old stage 10-week-old stage

Normal

Female

10x 3' v3

Cell

Homo sapiens

T cell Central nervous system macrophage Natural killer cell Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Committed oligodendrocyte precursor Cerebellar granule cell Cerebellar inhibitory gabaergic interneuron Ependymal cell Microglial cell Bergmann glial cell B cell Pericyte Neuron Monocyte Purkinje cell Vascular associated smooth muscle cell Astrocyte Unipolar brush cell Fibroblast

Cerebellar vermis

42-year-old stage 29-year-old stage 50-year-old stage

Normal

Male

10x 3' v3

Nucleus

Homo sapiens

T cell Tracheobronchial smooth muscle cell Neutrophil Club cell Dendritic cell, human Natural killer cell Endothelial cell of lymphatic vessel Lung secretory cell Erythrocyte Small pre-b-ii cell Endothelial cell Mature nk t cell Pro-b cell Mast cell Cd8-positive, alpha-beta t cell Pulmonary neuroendocrine cell Platelet Late pro-b cell Pre-b-i cell Group 2 innate lymphoid cell Basal cell B-1a b cell Endothelial cell of artery Capillary endothelial cell Schwann cell Classical monocyte Smooth muscle cell Respiratory tract epithelial cell Plasmacytoid dendritic cell Precursor b cell Lung multiciliated epithelial cell Early lymphoid progenitor Immature schwann cell Bronchus fibroblast of lung B-1b b cell Primitive red blood cell Group 3 innate lymphoid cell Thymocyte T-helper 17 cell Macrophage Cd16-positive, cd56-dim natural killer cell, human Regulatory t cell Large pre-b-ii cell Pulmonary alveolar type 1 cell Promonocyte Bone marrow cell Fibroblast of lung Hematopoietic stem cell Common myeloid progenitor Cd4-positive, alpha-beta t cell Vein endothelial cell Mesenchymal cell Eosinophil Megakaryocyte Squamous epithelial cell Mesothelial cell Pulmonary interstitial fibroblast Pericyte Granulocyte monocyte progenitor cell Promyelocyte Neuron Immature b cell Megakaryocyte-erythroid progenitor cell Epithelial cell of lung Reticulocyte Vascular associated smooth muscle cell Myofibroblast cell Erythroblast Basophil Dendritic cell Cd16-negative, cd56-bright natural killer cell, human Pulmonary alveolar type 2 cell Neural progenitor cell Non-classical monocyte Schwann cell precursor Chondrocyte Cd34-positive, cd56-positive, cd117-positive common innate lymphoid precursor, human

Lung

Carnegie stage 19 15th week post-fertilization stage 20th week post-fertilization stage 9th week post-fertilization stage 18th week post-fertilization stage 22nd week post-fertilization stage Carnegie stage 16 11th week post-fertilization stage

Normal

Female Male

10x 5' v1

Cell

Homo sapiens

Natural killer cell Pro-t cell Hematopoietic precursor cell Erythroid lineage cell Pre-conventional dendritic cell Plasmacytoid dendritic cell Thymocyte Mature b cell Plasma cell Granulocyte monocyte progenitor cell Mature t cell Immature b cell Monocyte Conventional dendritic cell

Thymus

6-month-old stage 10-month-old stage 5-month-old stage 14-month-old stage

Normal

Female Male

10x 3' v2

Cell

Homo sapiens

Endothelial cell of lymphatic vessel Endothelial cell Leukocyte Lymphocyte Adipocyte Macrophage Mesothelial cell Pericyte Neuron Vascular associated smooth muscle cell Fibroblast

Ascending aorta

69-year-old stage 71-year-old stage 53-year-old stage 52-year-old stage 56-year-old stage 55-year-old stage 58-year-old stage 64-year-old stage 63-year-old stage 40-year-old stage

Aortic aneurysm Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

Arachnoid barrier cell Mesenchyme condensation cell Leptomeningeal cell Mesenchymal cell Circulating fibrocyte Fibroblast of choroid plexus Mesothelial cell of dura mater Fibroblast Chondrocyte

Forebrain meninges Brain meninx Meninx

13th week post-fertilization stage 12th week post-fertilization stage Carnegie stage 20 9th week post-fertilization stage Carnegie stage 23 10th week post-fertilization stage Carnegie stage 21 Carnegie stage 16 Carnegie stage 18

Normal

Female Male

10x 3' v3

Cell

Homo sapiens

Cd14-positive, cd16-positive monocyte Platelet Plasmacytoid dendritic cell Cd14-positive monocyte Megakaryocyte B cell Monocyte Conventional dendritic cell

Blood

37-year-old stage 21-year-old stage 34-year-old stage 42-year-old stage 26-year-old stage 43-year-old stage 53-year-old stage 52-year-old stage 54-year-old stage 48-year-old stage 30-year-old stage 39-year-old stage 44-year-old stage 29-year-old stage 38-year-old stage 55-year-old stage 50-year-old stage 28-year-old stage 51-year-old stage 57-year-old stage 49-year-old stage 24-year-old stage 23-year-old stage 35-year-old stage 58-year-old stage 25-year-old stage 32-year-old stage 33-year-old stage 45-year-old stage 41-year-old stage 46-year-old stage 60-year-old stage 18-year-old stage 31-year-old stage 36-year-old stage 22-year-old stage 19-year-old stage 20-year-old stage 47-year-old stage 27-year-old stage 40-year-old stage

Normal

Female Male

10x 5' v2

Cell

Mus musculus

Glutamatergic neuron Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Smooth muscle cell Macrophage Leptomeningeal cell Astrocyte Gabaergic neuron

Primary motor cortex

Prime adult stage

Normal

Female Male

10x 3' v3

Cell

Homo sapiens

Stromal cell of endometrium Uterine smooth muscle cell Endothelial cell of uterus Lymphocyte Macrophage Epithelial cell of uterus Ciliated epithelial cell

Endometrium

Young adult stage

Normal

Female

10x genomics v3