Homo sapiens

Retinal pigment epithelial cell

Chorioretinal region

69-year-old stage 21-year-old stage 34-year-old stage 65-year-old stage 43-year-old stage 71-year-old stage 53-year-old stage 68-year-old stage 30-year-old stage 82-year-old stage 50-year-old stage 72-year-old stage 81-year-old stage 16-year-old stage 58-year-old stage 25-year-old stage 90 year-old and over stage 32-year-old stage 77-year-old stage 64-year-old stage 62-year-old stage 86-year-old stage 46-year-old stage 60-year-old stage Newborn stage (0-28 days) 63-year-old stage 47-year-old stage 11-year-old stage 27-year-old stage 10-year-old stage

Normal

Female Male

10x 5' v2 10x 3' v3

Nucleus

Homo sapiens

Brainstem motor neuron Oligodendrocyte precursor cell Endothelial cell Inhibitory interneuron Ependymal cell Microglial cell Granule cell Gabaergic interneuron Meningeal macrophage Glial cell Interneuron Choroid plexus epithelial cell Bergmann glial cell Pericyte Cerebellar granule cell precursor Purkinje cell Astrocyte

Cerebellum

21st week post-fertilization stage 14th week post-fertilization stage 20th week post-fertilization stage 17th week post-fertilization stage 12th week post-fertilization stage 9th week post-fertilization stage 10th week post-fertilization stage 18th week post-fertilization stage 11th week post-fertilization stage

Normal

Female Male

Split-seq

Nucleus Cell

Homo sapiens

Endothelial cell of hepatic sinusoid T cell Neutrophil Hepatocyte Natural killer cell Erythrocyte Gamma-delta t cell Kupffer cell Platelet Cycling plasma cell Macrophage Mature b cell Cholangiocyte Hematopoietic stem cell Plasma cell Cycling myeloid cell Conventional dendritic cell Mononuclear phagocyte

Right lobe of liver Caudate lobe of liver

69-year-old stage 26-year-old stage 57-year-old stage 15-19 year-old Late adult stage Prime adult stage Child stage (1-4 yo) Young adult stage Juvenile stage (5-14 yo)

Normal

Female Male

10x 5' v2 10x 5' v1 10x 3' v3 10x 3' v2

Cell

Callithrix jacchus

Astrocyte

Dorsolateral prefrontal cortex Parietal cortex Primary visual cortex Temporal cortex Prefrontal cortex Temporal lobe Primary somatosensory cortex Primary auditory cortex Brodmann (1909) area 23 Primary motor cortex Secondary visual cortex

Prime adult stage

Normal

Female Male

10x 3' v3

Nucleus

Homo sapiens

T cell Luminal cell of prostate epithelium Natural killer cell Endothelial cell of lymphatic vessel Cytotoxic t cell Endothelial cell Prostate neuroendocrine cell Epithelial cell of prostate Mast cell Plasmacytoid dendritic cell Macrophage Regulatory t cell Fibroblast of connective tissue of prostate Myeloid cell Glial cell Smooth muscle cell of prostate Plasma cell Vein endothelial cell Ciliated epithelial cell B cell Pericyte Monocyte Vascular associated smooth muscle cell Myelinating schwann cell Basal cell of prostate epithelium Club-like cell of the urethral epithelium

Prostate gland

69-year-old stage 75-year-old stage 71-year-old stage 61-year-old stage 54-year-old stage 68-year-old stage 72-year-old stage 59-year-old stage 64-year-old stage 45-year-old stage 62-year-old stage 70-year-old stage 46-year-old stage 60-year-old stage 63-year-old stage

Prostatic acinar adenocarcinoma

Male

10x 3' v3

Cell

Homo sapiens

Merkel cell Melanocyte Hair follicular keratinocyte Basal cell of epidermis Keratinocyte Spinous cell of epidermis Granular cell of epidermis Hematopoietic cell

Skin of prepuce of penis Skin of trunk Skin of scalp

Adult stage Newborn stage (0-28 days)

Normal

Female Male

10x 3' v2

Cell

Homo sapiens

Extravillous trophoblast Placental villous trophoblast Syncytiotrophoblast cell

Placenta

Organogenesis stage

Normal

10x 3' v3

Cell

Mus musculus

Oligodendrocyte precursor cell Endothelial cell Oligodendrocyte Mature nk t cell Schwann cell Ependymal cell Macrophage Microglial cell Mature microglial cell Leptomeningeal cell Pericyte Neuron Astrocyte

Spinal cord

3-6 month-old mature stage

Spinal cord injury Normal

Female

10x 3' v2

Nucleus

Mus musculus

Club cell Aortic smooth muscle cell Endothelial cell of lymphatic vessel Multiciliated epithelial cell of the bronchus Endothelial cell of artery Capillary endothelial cell Pulmonary alveolar type 1 cell Vein endothelial cell Mesenchymal cell Mesothelial cell of visceral pleura Progenitor cell Mesenchymal stem cell Vascular associated smooth muscle cell Hematopoietic cell Pulmonary alveolar type 2 cell Enucleate erythrocyte

Lung

Theiler stage 27 Prime adult stage Theiler stage 25 2-week-old stage 7-day-old stage Theiler stage 21 Theiler stage 23

Normal

10x 3' v2

Cell

Homo sapiens

Dentate gyrus granule cell

Subthalamic nucleus Medial geniculate body Rostral ca3 Subicular complex Hippocampal field Middle temporal gyrus Substantia nigra Pulvinar nucleus Primary auditory cortex Primary motor cortex Dentate gyrus of hippocampal formation Lateral geniculate body

42-year-old stage 29-year-old stage 50-year-old stage 60-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Tupaia belangeri Mus musculus Homo sapiens

Neuron

Normal

10x 3' v3

Homo sapiens

Hepatocyte Erythrocyte Endothelial cell Kupffer cell Mature nk t cell Hepatic stellate cell Lymphocyte Cholangiocyte Neoplastic cell B cell Neuron

Liver

Normal Blastoma

10x 3' v3

Nucleus