Homo sapiens

Cytotoxic t cell Myeloid cell Mast cell Smooth muscle cell of prostate Luminal cell of prostate epithelium Glial cell Vein endothelial cell Myelinating schwann cell Plasma cell Epithelial cell of prostate B cell Regulatory t cell Prostate neuroendocrine cell Club-like cell of the urethral epithelium Vascular associated smooth muscle cell Pericyte Fibroblast of connective tissue of prostate Plasmacytoid dendritic cell Basal cell of prostate epithelium Endothelial cell of lymphatic vessel Natural killer cell Macrophage Ciliated epithelial cell Monocyte T cell Endothelial cell

Prostate gland

54-year-old stage 62-year-old stage 72-year-old stage 61-year-old stage 70-year-old stage 45-year-old stage 59-year-old stage 75-year-old stage 64-year-old stage 68-year-old stage 69-year-old stage 63-year-old stage 60-year-old stage 46-year-old stage 71-year-old stage

Prostatic acinar adenocarcinoma

Male

10x 3' v3

Cell

Homo sapiens

Keratinocyte Granular cell of epidermis Hair follicular keratinocyte Hematopoietic cell Melanocyte Basal cell of epidermis Merkel cell Spinous cell of epidermis

Skin of prepuce of penis Skin of scalp Skin of trunk

Adult stage Newborn stage (0-28 days)

Normal

Female Male

10x 3' v2

Cell

Homo sapiens

Placental villous trophoblast Extravillous trophoblast Syncytiotrophoblast cell

Placenta

Organogenesis stage

Normal

10x 3' v3

Cell

Mus musculus

Schwann cell Astrocyte Leptomeningeal cell Mature microglial cell Oligodendrocyte precursor cell Oligodendrocyte Pericyte Ependymal cell Macrophage Mature nk t cell Microglial cell Neuron Endothelial cell

Spinal cord

3-6 month-old mature stage

Spinal cord injury Normal

Female

10x 3' v2

Nucleus

Mus musculus

Vein endothelial cell Mesenchymal stem cell Hematopoietic cell Mesenchymal cell Mesothelial cell of visceral pleura Vascular associated smooth muscle cell Capillary endothelial cell Club cell Pulmonary alveolar type 2 cell Enucleate erythrocyte Progenitor cell Pulmonary alveolar type 1 cell Endothelial cell of lymphatic vessel Aortic smooth muscle cell Multiciliated epithelial cell of the bronchus Endothelial cell of artery

Lung

7-day-old stage Theiler stage 23 Theiler stage 21 Theiler stage 25 Theiler stage 27 Prime adult stage 2-week-old stage

Normal

10x 3' v2

Cell

Homo sapiens

Neuron

Primary motor cortex Dentate gyrus of hippocampal formation Subthalamic nucleus Lateral geniculate body Substantia nigra Primary auditory cortex Middle temporal gyrus Pulvinar nucleus Medial geniculate body Subicular complex Hippocampal field Rostral ca3

42-year-old stage 50-year-old stage 29-year-old stage 60-year-old stage

Normal

Female Male

10x 3' v3

Nucleus

Mus musculus Tupaia belangeri Homo sapiens

Neuron

Normal

10x 3' v3

Homo sapiens

Kupffer cell Cholangiocyte B cell Neoplastic cell Hepatocyte Lymphocyte Hepatic stellate cell Erythrocyte Mature nk t cell Neuron Endothelial cell

Liver

Blastoma Normal

10x 3' v3

Nucleus

Homo sapiens

Cd16-positive, cd56-dim natural killer cell, human Cd14-positive monocyte Dendritic cell B cell Erythroid lineage cell Cd8-positive, alpha-beta t cell Natural killer cell Platelet Cd4-positive, alpha-beta t cell

Blood

39-year-old stage 78-year-old stage 73-year-old stage 74-year-old stage 83-year-old stage 85-year-old stage 81-year-old stage 61-year-old stage 48-year-old stage 70-year-old stage 58-year-old stage 50-year-old stage 89-year-old stage 68-year-old stage 77-year-old stage 60-year-old stage 80-year-old stage 91-year-old stage 67-year-old stage 65-year-old stage 71-year-old stage

Clonal hematopoiesis Normal

Female Male

10x 3' v3

Cell

Homo sapiens

Astrocyte Oligodendrocyte precursor cell Oligodendrocyte Microglial cell Neuron Endothelial cell

Occipital cortex

62-year-old stage 73-year-old stage 74-year-old stage 83-year-old stage 96-year-old stage 70-year-old stage 58-year-old stage 68-year-old stage 66-year-old stage 88-year-old stage 63-year-old stage 84-year-old stage 67-year-old stage 65-year-old stage

Normal Frontotemporal dementia

Female Male

10x 3' v3

Nucleus

Homo sapiens

Plasmablast Effector memory cd4-positive, alpha-beta t cell Mucosal invariant t cell Common myeloid progenitor Hematopoietic multipotent progenitor cell Cd16-positive, cd56-dim natural killer cell, human Mast cell Effector memory cd8-positive, alpha-beta t cell Early lymphoid progenitor Central memory cd4-positive, alpha-beta t cell Neutrophil Pro-b cell Common dendritic progenitor Memory b cell Small pre-b-ii cell Plasma cell Gamma-delta t cell Regulatory t cell Neutrophil progenitor cell Megakaryocyte Non-classical monocyte Plasmacytoid dendritic cell, human Plasmacytoid dendritic cell Erythroid lineage cell Megakaryocyte-erythroid progenitor cell Effector memory cd8-positive, alpha-beta t cell, terminally differentiated Cd16-negative, cd56-bright natural killer cell, human Granulocyte monocyte progenitor cell Central memory cd8-positive, alpha-beta t cell Erythrocyte Conventional dendritic cell Thymocyte Mature nk t cell Classical monocyte Promyelocyte Naive b cell Megakaryocyte progenitor cell T follicular helper cell

Bone marrow

61-year-old stage Sixth decade stage 42-year-old stage 17-year-old stage 59-year-old stage Eighth decade stage 30-year-old stage 22-year-old stage 31-year-old stage Seventh decade stage

Normal

Female Male

10x 5' transcription profiling 10x 3' v3 10x 5' v2 Smart-seq2 10x 5' v1

Cell

Homo sapiens

Fibroblast Mast cell Vein endothelial cell Smooth muscle cell Neutrophil Plasma cell B cell Regulatory t cell Capillary endothelial cell Pericyte Myofibroblast cell Cd8-positive, alpha-beta t cell Endothelial cell of lymphatic vessel Natural killer cell Macrophage Bladder urothelial cell Erythrocyte Monocyte Mature nk t cell Cd4-positive, alpha-beta t cell T cell Endothelial cell

Bladder organ

61-year-old stage 45-year-old stage 59-year-old stage 60-year-old stage 56-year-old stage

Normal

Female Male

10x 3' v3 Smart-seq2

Cell